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Tracer Technology Benefits

Tracer offers a set of core capabilities that improve visibility and analysis across scientific workflows compared to traditional monitoring tools:
  • Deep information: enabling faster and more accurate issue detection.
  • Workflow-agnostic: Works with any workflow without required modifications.
  • Advanced Features: driving up value creation such as resource and cost optimization

How Tracer Can Offer This

Tracer is built on top of eBPF (extended Berkeley Packet Filter), a Linux kernel technology that allows safe, high-performance instrumentation without kernel modifications. eBPF programs run inside the kernel and expose detailed telemetry to Tracer’s runtime, which correlates system events with pipeline steps, tools, and samples. Below is a high-level view of how Tracer uses eBPF during development and runtime: eBPF Overview

Development

eBPF programs are compiled into safe bytecode and validated by the kernel’s verifier. Tracer distributes precompiled, architecture-compatible eBPF modules through its Go-based agent, so no user compilation is required.

Runtime

At runtime, Tracer’s eBPF modules attach to system call boundaries, network operations, scheduling events, and other kernel hooks. Using eBPF Maps, Tracer aggregates telemetry efficiently and streams enriched metrics to its backend. This enables:
  • Per-tool and per-task CPU/I/O visibility
  • Real-time failure attribution
  • Identification of idle or stuck processes
  • Network and storage performance insights
  • Cost and resource usage mapping at sample, step, and pipeline levels
All instrumentation operates with minimal overhead and without requiring privileged kernel modules.

Why eBPF

Understanding why Tracer uses eBPF for observability Traditional approaches rely on logs, metrics exporters, or code instrumentation. eBPF serves four main purposes for Tracer:


See everything
System calls, process lifecycle, I/O, and scheduling events


Stay lightweight
Sampling at kernel level without copying large data


Stay safe
Verified, sandboxed bytecode that cannot crash your node


Stay universal
Works with any container, binary, or programming language
This provides low-overhead visibility into black-box tools, which is particularly valuable for bioinformatics and computational biology pipelines.

How Tracer works, next to eBPF

Tracer observes pipeline execution directly at the OS level using eBPF and a multi-layer data processing architecture. The workflow consists of four main stages:
1

Attach

The Tracer agent attaches non-intrusively to running processes and containers. No restarts, code changes, or wrapper scripts are required.
2

Collect

Using eBPF, the agent captures granular system-level signals, including CPU scheduling delays, I/O operations, memory activity, GPU context switches, and other kernel events, while maintaining low overhead.
3

Correlate

Captured events are mapped back to the structure of the pipeline, including jobs, tasks, and steps. This provides context for understanding runtime behavior across diverse tools and workflow engines.
4

Stream

Structured telemetry is sent to the Tracer backend (on-premises or cloud). Data is aggregated, visualized in dashboards, and made available for export through standard interfaces such as APIs.
Tracer Functioning Overview